Protein ZmTRAF11
ZmTRAF11 is a protein in the TRAF family.
Information
Coreg Name: ZmTRAF11
Species: Maize
Coreg Family: TRAF
Gene Name(Synonym): nan
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmTRAF11

ZmTRAF11 is a protein in the TRAF family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00651PF07707
Zm00001eb278060_T001
Zm00001eb278060_T002
Zm00001eb278060_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d037051DAPseq no logo sequence fimo position
Zm00001d037051DAPseq no logo sequence fimo position
Zm00001d037051ChIPseq no logo sequence fimo position
Zm00001d037051PChIPseq no logo sequence fimo position

Interactions where ZmTRAF11 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmTRAF11 is the target  
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There are 64 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb278060_T001 from maize genome v5

Amino Acid Sequence
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MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00651
PF07707
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Nucleotide Sequence
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GAATTTACTCTGTCTTGTTCAGCTG...

GRMZM2G038691_T01 from maize genome v3


Related TFome: pUT6446

Amino Acid Sequence
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MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

Nucleotide Sequence
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GTCTGACATGTTTTAAACCATATTT...

GRMZM2G038691_T02 from maize genome v3

Amino Acid Sequence
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MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEFSH

Nucleotide Sequence
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GTCTGACATGTTTTAAACCATATTT...

Zm00001d037051_T001 from maize genome v4

Amino Acid Sequence
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MDPDFSPASGGPSFEFAFNSVNFSDRVLRIEIVAGDDALGAKGATGEGCSSLADWACHRKRRREELRRDKESRKYMPDPA
NCKVEAEECDAYEEGNEPVAMIEESPPDIEADGEDGKSSDSYCSMECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKE
SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMIADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSS
ISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILG
TRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRP
YRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPS
GEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGVLHLRAELTIKQP

Nucleotide Sequence
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ACCCCTCCACGTCTCCGCTTCTCGT...

Zm00001d037051_T002 from maize genome v4

Amino Acid Sequence
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MNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILGTRLLPLVRFCHMTCRKLRKVIACSDLDHEQAT
KCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRPYRQCIAYLDLKREECSRLFPSGRIYSQAFHLA
GQGFFLSAHCNVDQQSAFY

Nucleotide Sequence
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AACTTTTGACTGAAACATTGAATTT...

Zm00001eb278060_T002 from maize genome v5

Amino Acid Sequence
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MECTQVLRVKSMYISSAILAAKSPFFYKLFSNGMKESDQRHATLRITASEENALMELLSFMYSGKLTTNQPTVLLDILMI
ADKFEVGSCMRHCSQLLRNLPMTTESALLYLDLPSSISMAAAVQPLTDTAKEFLANKYKDLTKFQDEAMNIPLAGIEAIL
WSNDLQVASEDAIYDFMIKWARAQYPKLEERREILGTRLLPLVRFCHMTCRKLRKVIACSDLDHEQATKCVTEALLYKAD
APHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRPYRQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNV
DQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPSGEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLFMADDSLFFIDGV
LHLRAELTIKQP

Nucleotide Sequence
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ATCCCATCCTTTTATGAGAGTGGAC...

Zm00001eb278060_T003 from maize genome v5

Amino Acid Sequence
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MNIPLAGIEAILWSNDLQVASEDAIYDFMIKWARAQYPKLEERREILGTRLLPLVRFCHMTCRKLRKVIACSDLDHEQAT
KCVTEALLYKADAPHRQRALAADVMTCRKYAERAYKYRPLKVVEFDRPYRQCIAYLDLKREECSRLFPSGRIYSQAFHLA
GQGFFLSAHCNVDQQSAFYCFGLFLGMQEKGSTSVTVDYEFAARTRPSGEFVSKYKGYYTFTGGKAVGYRNLFAIPWPLF
MADDSLFFIDGVLHLRAELTIKQP

Nucleotide Sequence
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AACTTTTGACTGAAACATTGAATTT...


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